STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43758.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
mraZ
mraZ protein; COG2001 Uncharacterized protein conserved in bacteria; Belongs to the MraZ family.
       0.809
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.809
EDM44851.1
Hypothetical protein.
  
     0.756
EDM45115.1
COG1577 Mevalonate kinase.
  
     0.751
EDM45207.1
Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.745
EDM43759.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.740
EDM45203.1
Hypothetical protein.
  
     0.735
EDM44572.1
Hypothetical protein.
  
     0.718
EDM44974.1
Hypothetical protein.
  
     0.717
EDM43763.1
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
     0.714
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.