STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43782.1PorT-related protein. (234 aa)    
Predicted Functional Partners:
EDM44265.1
Gliding motility-related protein.
  
   
 0.830
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
   
 0.827
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.809
EDM44977.1
Lipoprotein, putative.
 
   
 0.806
EDM45689.1
Outer membrane protein, ompH family; COG2825 Outer membrane protein.
 
     0.774
EDM44170.1
Hypothetical protein; COG0364 Glucose-6-phosphate 1-dehydrogenase.
  
     0.758
EDM43750.1
Gliding motility protein.
  
     0.741
EDM44976.1
Gliding motility-related protein; COG0840 Methyl-accepting chemotaxis protein.
 
   
 0.730
EDM45114.1
4-hydroxybenzoate-octaprenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
     0.723
EDM44225.1
Possible gliding motility-related protein; possible serine kinase.
  
   
 0.719
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.