STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43797.1Hypothetical protein. (400 aa)    
Predicted Functional Partners:
EDM43798.1
Haloacid dehalogenase-like hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
       0.616
EDM43801.1
Hypothetical protein.
 
     0.614
EDM44023.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.603
EDM43652.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
  
     0.601
EDM43796.1
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
       0.570
EDM43030.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.548
EDM44974.1
Hypothetical protein.
  
     0.539
EDM45247.1
Hypothetical protein.
  
     0.529
EDM43035.1
Hypothetical protein.
  
     0.518
EDM44978.1
Formiminoglutamase-related protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
     0.517
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.