STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43801.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
EDM43799.1
Hypothetical protein.
       0.780
EDM43800.1
Hypothetical protein.
       0.773
EDM43798.1
Haloacid dehalogenase-like hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
       0.692
EDM44531.1
Hypothetical protein.
  
     0.684
EDM43036.1
Hypothetical protein.
  
     0.620
EDM43797.1
Hypothetical protein.
 
     0.614
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.602
EDM44840.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.589
EDM43064.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.549
EDM45278.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.534
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.