STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43801.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
EDM43799.1
Hypothetical protein.
       0.778
EDM43800.1
Hypothetical protein.
       0.773
EDM44531.1
Hypothetical protein.
  
     0.684
EDM43798.1
Haloacid dehalogenase-like hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
       0.667
EDM43036.1
Hypothetical protein.
  
     0.620
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.602
EDM44840.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.589
EDM43797.1
Hypothetical protein.
 
     0.581
EDM43064.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.549
EDM45278.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.534
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.