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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43871.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
EDM44081.1
Ribonuclease Z.
  
     0.749
EDM43870.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG3565 Predicted dioxygenase of extradiol dioxygenase family.
       0.713
EDM45611.1
Hypothetical protein.
  
     0.712
EDM43869.1
Hypothetical protein; COG0628 Predicted permease.
       0.709
EDM44758.1
Hypothetical protein.
  
     0.684
EDM43872.1
Hypothetical protein; COG0433 Predicted ATPase.
       0.653
EDM45608.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.644
EDM43040.1
COG5651 PPE-repeat proteins.
  
     0.643
EDM43331.1
comEA protein-related protein; COG1555 DNA uptake protein and related DNA-binding proteins.
  
     0.638
EDM44037.1
Hypothetical protein.
  
     0.635
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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