STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (242 aa)    
Predicted Functional Partners:
EDM43465.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  0.990
EDM45029.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  0.990
EDM44141.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
  0.990
EDM45667.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  0.989
EDM45668.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  0.989
EDM45037.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 
  0.904
EDM43211.1
ABC transporter, ATP-binding protein, MsbA family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
    
0.904
EDM45664.1
Membrane fusion efflux protein, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.863
EDM42941.1
Putative transmembrane permease; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
  0.778
EDM45305.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
  0.778
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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