STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43895.1COG1846 Transcriptional regulators. (150 aa)    
Predicted Functional Partners:
EDM44279.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.834
EDM43894.1
YCE I like family protein; Belongs to the UPF0312 family.
       0.767
EDM43896.1
Hypothetical protein.
       0.546
EDM45557.1
Bifunctional protein: riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family.
     
  0.515
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
  0.480
EDM44470.1
COG0431 Predicted flavoprotein.
    
 0.432
EDM43892.1
COG0512 Anthranilate/para-aminobenzoate synthases component II.
       0.430
EDM43893.1
COG0147 Anthranilate/para-aminobenzoate synthases component I.
       0.430
EDM43036.1
Hypothetical protein.
  
     0.426
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.