STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43916.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
EDM43072.1
Hypothetical protein.
 
     0.787
EDM45340.1
Hypothetical protein.
  
     0.772
EDM43690.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.770
EDM44557.1
Hypothetical protein; COG2730 Endoglucanase.
  
     0.770
EDM44075.1
Hypothetical protein.
  
     0.769
EDM45553.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.768
EDM45605.1
COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
     
  0.756
EDM43791.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.756
EDM45213.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.753
EDM43769.1
YqeY family protein.
     
  0.706
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (16%) [HD]