STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43929.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
EDM43930.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.952
murQ
N-acetylmuramic acid-6-phosphate etherase.
       0.715
EDM43928.1
Glucokinase regulatory protein, sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
       0.705
EDM43931.1
COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
       0.657
EDM44251.1
Hypothetical protein.
  
     0.625
EDM43195.1
Hypothetical protein.
  
     0.548
EDM44310.1
Hypothetical protein.
  
     0.529
EDM44436.1
Hypothetical protein.
  
     0.522
EDM45251.1
COG1272 Predicted membrane protein, hemolysin III homolog.
  
     0.520
EDM44147.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.509
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (18%) [HD]