STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43930.1COG4771 Outer membrane receptor for ferrienterochelin and colicins. (787 aa)    
Predicted Functional Partners:
EDM43929.1
Hypothetical protein.
 
     0.952
EDM43931.1
COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
      0.787
murQ
N-acetylmuramic acid-6-phosphate etherase.
       0.698
EDM43928.1
Glucokinase regulatory protein, sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
       0.693
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.601
EDM45062.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.566
EDM45683.1
Hypothetical protein.
  
  0.552
EDM43529.1
Putative outer membrane protein, probably involved in nutrient binding.
  
  
  0.533
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  0.532
EDM45706.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.525
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.