Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM43941.1Glycosyl hydrolase; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor. (824 aa)    
Predicted Functional Partners:
EDM45268.1
Hypothetical protein.
  
     0.648
EDM43134.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; COG1404 Subtilisin-like serine proteases.
  
     0.633
EDM44228.1
Hypothetical protein.
  
     0.624
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.568
EDM43940.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.535
EDM42938.1
Thermophilic serine proteinase; COG1404 Subtilisin-like serine proteases.
 
 
  0.523
EDM44542.1
Conserved hypothetical signal peptide protein.
  
     0.519
EDM44895.1
tolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.422
EDM42919.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.422
EDM44654.1
Hypothetical protein; COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N).
  
     0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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