EDM43952.1 protein (unidentified eubacterium SCB49)

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Score

EDM43952.1

Hypothetical protein. (50 aa)

Predicted Functional Partners:

rpmG

0.889

rpmB

0.872

rpmC

0.758

rpsU

0.741

rpmH

0.699

rpsT-2

0.699

rplM

0.699

rpsI

0.699

rpsB

0.699

rpmF

0.699

Your Current Organism:

unidentified eubacterium SCB49

NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDM43952.1	rplM	SCB49_10192	SCB49_04700	Hypothetical protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.699
EDM43952.1	rpmB	SCB49_10192	SCB49_10182	Hypothetical protein.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.872
EDM43952.1	rpmC	SCB49_10192	SCB49_09540	Hypothetical protein.	COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.758
EDM43952.1	rpmF	SCB49_10192	SCB49_05807	Hypothetical protein.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.699
EDM43952.1	rpmG	SCB49_10192	SCB49_10187	Hypothetical protein.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.889
EDM43952.1	rpmH	SCB49_10192	SCB49_00175	Hypothetical protein.	Thiol-disulfide oxidoreductase; Belongs to the bacterial ribosomal protein bL34 family.	0.699
EDM43952.1	rpsB	SCB49_10192	SCB49_04710	Hypothetical protein.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.699
EDM43952.1	rpsI	SCB49_10192	SCB49_04705	Hypothetical protein.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.699
EDM43952.1	rpsT-2	SCB49_10192	SCB49_01787	Hypothetical protein.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.699
EDM43952.1	rpsU	SCB49_10192	SCB49_01192	Hypothetical protein.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.741
rplM	EDM43952.1	SCB49_04700	SCB49_10192	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein.	0.699
rplM	rpmB	SCB49_04700	SCB49_10182	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplM	rpmC	SCB49_04700	SCB49_09540	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.992
rplM	rpmF	SCB49_04700	SCB49_05807	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpmG	SCB49_04700	SCB49_10187	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.988
rplM	rpmH	SCB49_04700	SCB49_00175	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Thiol-disulfide oxidoreductase; Belongs to the bacterial ribosomal protein bL34 family.	0.974
rplM	rpsB	SCB49_04700	SCB49_04710	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rplM	rpsI	SCB49_04700	SCB49_04705	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsT-2	SCB49_04700	SCB49_01787	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplM	rpsU	SCB49_04700	SCB49_01192	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.983