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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44018.1Formiminoglutamate hydrolase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. (334 aa)    
Predicted Functional Partners:
hutI
COG1228 Imidazolonepropionase and related amidohydrolases.
 
 
 0.971
EDM44017.1
Transcriptional regulator, MarR family protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
    
  0.778
EDM43038.1
COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.714
EDM44112.1
COG2986 Histidine ammonia-lyase.
 
 
 0.703
EDM45131.1
COG0739 Membrane proteins related to metalloendopeptidases.
  
 
 0.665
EDM42866.1
COG0078 Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.658
argH
COG0165 Argininosuccinate lyase.
     
 0.654
EDM44321.1
Hypothetical protein; COG0421 Spermidine synthase.
  
 
 0.643
EDM43630.1
Arginine decarboxylase, biosynthetic; COG1166 Arginine decarboxylase (spermidine biosynthesis).
  
 
 0.609
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.591
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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