STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44024.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
EDM43750.1
Gliding motility protein.
  
     0.743
EDM44225.1
Possible gliding motility-related protein; possible serine kinase.
  
     0.738
EDM45644.1
Possible gliding motility-related protein.
  
     0.736
EDM42915.1
Possible gliding motility-related protein; possible serine kinase.
  
     0.722
EDM43339.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.695
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.672
EDM43723.1
Hypothetical protein; COG2017 Galactose mutarotase and related enzymes.
  
     0.663
EDM43041.1
Hypothetical protein; COG1193 Mismatch repair ATPase (MutS family).
 
     0.659
EDM45183.1
Hypothetical protein; Belongs to the ClpS family.
  
     0.658
EDM43312.1
Hypothetical protein.
  
     0.655
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.