Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44026.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
EDM44244.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
   
 0.767
EDM44245.1
Pyridine nucleotide-disulphide oxidoreductase domain protein; COG0348 Polyferredoxin.
  
     0.728
EDM43637.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.719
EDM44243.1
Hypothetical protein.
 
     0.628
EDM44246.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.628
EDM44025.1
Long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase.
       0.623
EDM44658.1
Hypothetical protein.
  
     0.622
EDM45227.1
Hypothetical protein.
  
     0.579
EDM43247.1
Hypothetical protein.
 
     0.538
EDM44136.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
  
     0.537
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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