Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
Databases
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[Homology]
Score
EDM44032.1Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)    
Predicted Functional Partners:
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.925
EDM44033.1
Oligopeptidase (protease II); COG1770 Protease II.
  
  
 0.681
EDM43286.1
Hypothetical protein; COG0313 Predicted methyltransferases.
 
     0.563
EDM45658.1
Hypothetical protein; COG0018 Arginyl-tRNA synthetase.
  
     0.508
EDM43324.1
Elongation factor Tu; COG0690 Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
  
 
  0.503
EDM44765.1
COG1862 Preprotein translocase subunit YajC.
   
 
  0.496
EDM44090.1
Hypothetical protein.
 
  
 0.480
EDM43424.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
     0.463
secA-2
Translocase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
  
 
  0.460
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.447
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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