STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44098.1Hypothetical membrane protein. (191 aa)    
Predicted Functional Partners:
EDM44097.1
COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
       0.806
EDM44099.1
3-deoxy-manno-octulosonate cytidylyltransferase; COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; Belongs to the KdsB family.
       0.668
EDM44100.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.638
EDM44095.1
Hypothetical protein.
       0.562
EDM44096.1
Hypothetical protein.
       0.557
EDM44094.1
Putative methyltransferase; COG0742 N6-adenine-specific methylase.
       0.556
EDM42892.1
Hypothetical protein.
  
     0.454
EDM45434.1
Hypothetical protein.
  
     0.417
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.