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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44118.1Lipoprotein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (249 aa)    
Predicted Functional Partners:
EDM43612.1
Putative hemagglutinin; COG1705 Muramidase (flagellum-specific).
  
 
 0.765
EDM43086.1
B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.763
EDM43878.1
beta-N-acetylglucosaminidase; COG1472 Beta-glucosidase-related glycosidases.
 
 
 0.757
EDM44119.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.739
EDM43080.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.623
EDM44184.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; COG0773 UDP-N-acetylmuramate-alanine ligase.
 
 
  0.594
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
  0.579
EDM44120.1
Putative transmembrane HD family protein; COG1480 Predicted membrane-associated HD superfamily hydrolase.
       0.537
EDM45346.1
Peptidoglycan-binding LysM; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
 
 0.498
EDM44474.1
Hypothetical protein; COG1388 FOG: LysM repeat.
  
 
 0.485
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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