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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42879.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
EDM44612.1
Putative transmembrane protein; COG0457 FOG: TPR repeat.
  
     0.652
EDM42861.1
Hypothetical protein.
  
    0.630
EDM42871.1
Hypothetical protein.
  
     0.591
EDM42878.1
COG5337 Spore coat assembly protein.
       0.576
EDM42872.1
Hypothetical exported 24-amino acid repeat protein; COG2849 Uncharacterized protein conserved in bacteria.
 
     0.559
EDM44152.1
Hypothetical protein.
  
     0.557
EDM44313.1
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
     
 0.526
EDM44136.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
  
     0.512
EDM45556.1
Gamma-glutamyl carboxylase-like protein.
  
 0.510
nadK
NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.505
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.