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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (181 aa)    
Predicted Functional Partners:
EDM43056.1
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.982
EDM43057.1
Putative methionine sulfoxide reductase, SelR; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
 
 0.982
EDM43127.1
COG4232 Thiol:disulfide interchange protein.
    
 
 0.801
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.791
folE
COG0302 GTP cyclohydrolase I.
       0.773
EDM43945.1
Hypothetical protein.
   
 
 0.680
EDM44526.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family.
   
 
 0.680
EDM43420.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.652
EDM44157.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.652
EDM44178.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
    
  0.652
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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