STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM42892.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
EDM42891.1
Hypothetical protein.
 
     0.668
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.622
EDM42890.1
Hypothetical protein.
       0.613
EDM43063.1
Hypothetical protein.
  
     0.602
EDM44114.1
Hypothetical protein.
  
     0.577
EDM42889.1
Hypothetical protein.
       0.568
EDM43064.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.566
EDM44662.1
COG1652 Uncharacterized protein containing LysM domain.
 
     0.552
EDM45510.1
Hypothetical protein.
  
     0.539
EDM42888.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.511
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.