STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM42905.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EDM43668.1
Hypothetical protein.
  
 
  0.823
EDM42904.1
Hypothetical protein.
       0.773
EDM45131.1
COG0739 Membrane proteins related to metalloendopeptidases.
  
 0.736
EDM45548.1
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  0.729
EDM44374.1
Hypothetical protein.
  
     0.717
EDM45352.1
Auxin-regulated protein.
  
 
  0.637
EDM44976.1
Gliding motility-related protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.622
EDM43659.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.618
EDM45511.1
Hypothetical protein.
  
     0.590
EDM43089.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
 
 
 0.587
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.