Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM42915.1Possible gliding motility-related protein; possible serine kinase. (586 aa)    
Predicted Functional Partners:
EDM44974.1
Hypothetical protein.
 
 
 
 0.907
EDM45644.1
Possible gliding motility-related protein.
  
   
 0.834
EDM43750.1
Gliding motility protein.
  
   
 0.793
EDM44265.1
Gliding motility-related protein.
  
   
 0.773
EDM44977.1
Lipoprotein, putative.
  
  
 
0.766
EDM44975.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
   
 0.763
EDM44170.1
Hypothetical protein; COG0364 Glucose-6-phosphate 1-dehydrogenase.
  
     0.754
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.730
EDM44024.1
Hypothetical protein.
  
     0.722
EDM43312.1
Hypothetical protein.
 
     0.720
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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