close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM42922.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
EDM42925.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
     0.860
EDM43962.1
Outer membrane protein.
 
     0.773
EDM43220.1
Outer membrane protein; COG1409 Predicted phosphohydrolases.
 
     0.740
EDM43221.1
Outer membrane protein; COG2831 Hemolysin activation/secretion protein.
  
     0.738
EDM43218.1
Hypothetical protein.
 
    0.704
ribB
Bifunctional protein: GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.630
EDM42924.1
Ferredoxin-dependent glutamate synthase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
 
     0.550
EDM42923.1
Hypothetical protein.
       0.439
EDM44946.1
Hypothetical protein; COG1882 Pyruvate-formate lyase.
  
     0.429
EDM43482.1
Hypothetical protein; COG0541 Signal recognition particle GTPase.
  
     0.418
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.