Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM43152.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (370 aa)    
Predicted Functional Partners:
EDM44279.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.937
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.787
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.787
EDM44245.1
Pyridine nucleotide-disulphide oxidoreductase domain protein; COG0348 Polyferredoxin.
 
 
 0.615
EDM42924.1
Ferredoxin-dependent glutamate synthase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
 0.581
EDM45401.1
Putative hexuronate transport protein (MFS family); COG0477 Permeases of the major facilitator superfamily.
    
 0.493
EDM44244.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 
 0.483
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.475
EDM44251.1
Hypothetical protein.
  
 
 0.446
EDM45173.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 
 0.444
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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