STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43166.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
EDM43165.1
Methanol dehydrogenase regulator; COG0714 MoxR-like ATPases.
       0.757
EDM43167.1
Hypothetical protein.
       0.746
EDM43168.1
Hypothetical protein; COG2610 H+/gluconate symporter and related permeases.
       0.716
EDM43162.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
       0.483
EDM43163.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
       0.483
EDM43164.1
Putative exported peptidyl-prolyl cis-trans isomerase; COG0760 Parvulin-like peptidyl-prolyl isomerase.
       0.483
EDM43169.1
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase.
       0.480
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.