STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43186.1ABC transporter, ATP-binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (591 aa)    
Predicted Functional Partners:
EDM45669.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   
 
0.925
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
    
 0.720
EDM43390.1
HlyB/MsbA family ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
  0.674
EDM45421.1
ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
    
  0.670
EDM45285.1
Multiple sugar-binding ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
     
  0.653
EDM43979.1
COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.643
EDM44723.1
Probable ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.643
EDM43426.1
Oligopeptide ABC transporter, solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
 0.637
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
  0.621
EDM44661.1
ABC transporter ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
 
  
  0.617
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.