Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43195.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
EDM43339.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.777
EDM45062.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.774
EDM44037.1
Hypothetical protein.
  
     0.772
EDM43304.1
Hypothetical protein; COG1812 Archaeal S-adenosylmethionine synthetase.
  
     0.771
EDM45611.1
Hypothetical protein.
  
     0.771
EDM44081.1
Ribonuclease Z.
  
     0.769
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.765
EDM43076.1
Hypothetical protein.
  
     0.762
EDM43424.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
     0.758
EDM45673.1
Hypothetical protein.
  
     0.753
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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