Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43209.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
EDM44095.1
Hypothetical protein.
  
     0.766
EDM45611.1
Hypothetical protein.
  
     0.756
EDM43035.1
Hypothetical protein.
  
     0.753
EDM44580.1
Hypothetical protein.
  
     0.731
EDM43116.1
Hypothetical protein.
  
     0.715
EDM44012.1
Fused predicted transporter subunit of ABC superfamily: ATP-binding component.
  
     0.712
EDM43524.1
Fructose-6-phosphate aldolase 2; COG1225 Peroxiredoxin.
  
     0.711
EDM44081.1
Ribonuclease Z.
  
     0.709
EDM43304.1
Hypothetical protein; COG1812 Archaeal S-adenosylmethionine synthetase.
  
     0.703
EDM44162.1
Hypothetical protein.
  
     0.689
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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