EDM43215.1 protein (unidentified eubacterium SCB49)

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EDM43215.1

COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (93 aa)

Predicted Functional Partners:

rpsO-2

0.993

rpsT-2

0.987

rplS-2

0.984

rpmB

0.983

rpmF

0.982

rpmG

0.980

rpsR

0.980

rplM

0.979

rpsI

0.979

rpmA

0.979

Your Current Organism:

unidentified eubacterium SCB49

NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDM43215.1	rplM	SCB49_12089	SCB49_04700	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.979
EDM43215.1	rplS-2	SCB49_12089	SCB49_10102	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.984
EDM43215.1	rpmA	SCB49_12089	SCB49_07607	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.979
EDM43215.1	rpmB	SCB49_12089	SCB49_10182	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.983
EDM43215.1	rpmF	SCB49_12089	SCB49_05807	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.982
EDM43215.1	rpmG	SCB49_12089	SCB49_10187	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.980
EDM43215.1	rpsI	SCB49_12089	SCB49_04705	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.979
EDM43215.1	rpsO-2	SCB49_12089	SCB49_09305	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
EDM43215.1	rpsR	SCB49_12089	SCB49_12049	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.980
EDM43215.1	rpsT-2	SCB49_12089	SCB49_01787	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.987
rplM	EDM43215.1	SCB49_04700	SCB49_12089	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	0.979
rplM	rplS-2	SCB49_04700	SCB49_10102	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplM	rpmA	SCB49_04700	SCB49_07607	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplM	rpmB	SCB49_04700	SCB49_10182	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplM	rpmF	SCB49_04700	SCB49_05807	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpmG	SCB49_04700	SCB49_10187	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.988
rplM	rpsI	SCB49_04700	SCB49_04705	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO-2	SCB49_04700	SCB49_09305	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplM	rpsR	SCB49_04700	SCB49_12049	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.993
rplM	rpsT-2	SCB49_04700	SCB49_01787	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992