STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EDM42995.1Putative lipopolysaccharide biosynthesis protein; COG0438 Glycosyltransferase. (359 aa)    
Predicted Functional Partners:
EDM42994.1
Probable beta-glycosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.933
EDM42996.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
     0.929
EDM42992.1
COG0438 Glycosyltransferase.
 
     0.904
EDM42993.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
    0.778
EDM45367.1
Glycosyltransferase, group 1 family protein; COG0438 Glycosyltransferase.
  
     0.736
EDM42991.1
COG0438 Glycosyltransferase.
 
    
0.719
EDM43379.1
Wlac protein; COG0438 Glycosyltransferase.
  
     0.629
EDM42990.1
Hypothetical protein.
       0.615
EDM42989.1
Probable galactosyl transferase; COG0438 Glycosyltransferase.
 
    
0.607
EDM44461.1
GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
     
  0.498
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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