Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43016.1Putative transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators. (101 aa)    
Predicted Functional Partners:
EDM43013.1
Permease family protein; COG0701 Predicted permeases.
     
 0.691
EDM43015.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
     
 0.689
EDM43014.1
COG1765 Predicted redox protein, regulator of disulfide bond formation.
       0.658
EDM43017.1
COG4487 Uncharacterized protein conserved in bacteria.
       0.407
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.