STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43026.1Hypothetical protein. (422 aa)    
Predicted Functional Partners:
EDM43027.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.773
EDM43028.1
Alginate O-acetylation protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
       0.773
EDM44224.1
COG1843 Flagellar hook capping protein.
  
  
 0.761
EDM45506.1
CHU large protein; uncharacterized.
  
     0.702
EDM45150.1
Twin-arginine translocation pathway signal; COG3211 Predicted phosphatase.
  
     0.640
EDM43420.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.626
EDM44228.1
Hypothetical protein.
  
     0.626
EDM43025.1
Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
       0.592
EDM43612.1
Putative hemagglutinin; COG1705 Muramidase (flagellum-specific).
  
  
 0.551
EDM44203.1
Predicted aminopeptidase; COG0840 Methyl-accepting chemotaxis protein.
  
     0.543
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.