STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43036.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EDM43035.1
Hypothetical protein.
 
     0.932
EDM43037.1
COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.809
EDM44531.1
Hypothetical protein.
  
     0.770
EDM44095.1
Hypothetical protein.
  
     0.766
EDM45595.1
COG1538 Outer membrane protein.
  
     0.764
EDM45278.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.759
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.736
EDM44162.1
Hypothetical protein.
  
     0.724
EDM44081.1
Ribonuclease Z.
  
     0.705
EDM44096.1
Hypothetical protein.
  
     0.694
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.