STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43043.1COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (382 aa)    
Predicted Functional Partners:
EDM45645.1
COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
   
 0.936
EDM45711.1
Transcriptional regulator, rrf2 family protein; COG1959 Predicted transcriptional regulator.
  
 
 0.867
EDM44478.1
Transcriptional regulator, BadM/Rrf2 family protein; COG1959 Predicted transcriptional regulator.
  
 
 0.867
EDM45660.1
COG0694 Thioredoxin-like proteins and domains.
 
 0.863
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 0.852
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 0.852
EDM45519.1
Scaffold protein for iron-sulphur cluster assembly; Belongs to the HesB/IscA family.
 
 
 0.844
EDM43677.1
COG0694 Thioredoxin-like proteins and domains.
  
 0.840
EDM43679.1
COG0633 Ferredoxin.
  
 0.833
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
    
 
 0.779
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.