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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43058.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
EDM43022.1
Transketolase; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
  
  
  0.724
EDM43056.1
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.705
EDM43057.1
Putative methionine sulfoxide reductase, SelR; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
       0.705
EDM43055.1
Dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase); COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
    
  0.699
EDM44763.1
Hypothetical protein.
  
     0.654
EDM43059.1
COG0501 Zn-dependent protease with chaperone function.
    
  0.647
EDM43541.1
COG1396 Predicted transcriptional regulators.
  
     0.617
EDM42890.1
Hypothetical protein.
  
     0.595
EDM44073.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  
     0.592
EDM45227.1
Hypothetical protein.
  
     0.550
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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