Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM43081.1Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (315 aa)    
Predicted Functional Partners:
EDM44212.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.994
EDM44213.1
ABC transporter, ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.989
EDM43082.1
Possible oxidoreductase, Fe-S subunit; COG0247 Fe-S oxidoreductase.
       0.809
EDM43080.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
     0.720
EDM43881.1
COG2815 Uncharacterized protein conserved in bacteria.
  
     0.613
EDM44322.1
Outer membrane protein, OmpA family; COG1196 Chromosome segregation ATPases.
 
 
   0.575
EDM43083.1
Phosphoheptose isomerase.
       0.553
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
    0.534
EDM44331.1
Hypothetical protein.
  
     0.533
EDM43079.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
     
 0.524
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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