STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43084.1Fe-S oxidoreductase, possible dehydrogenase subunit; COG0247 Fe-S oxidoreductase. (263 aa)    
Predicted Functional Partners:
EDM43082.1
Possible oxidoreductase, Fe-S subunit; COG0247 Fe-S oxidoreductase.
     0.986
EDM44862.1
Phosphoenolpyruvate-protein phosphotransferase; COG3412 Uncharacterized protein conserved in bacteria; Belongs to the PEP-utilizing enzyme family.
    
  0.931
EDM44279.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.841
EDM43083.1
Phosphoheptose isomerase.
    
  0.760
EDM43085.1
Hypothetical protein.
       0.750
EDM44267.1
COG0281 Malic enzyme.
  
 
 0.735
EDM45207.1
Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.728
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
  0.710
EDM44339.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
  0.708
EDM43089.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.671
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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