STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43086.1B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases. (975 aa)    
Predicted Functional Partners:
EDM42942.1
COG3876 Uncharacterized protein conserved in bacteria.
 
 0.958
EDM43612.1
Putative hemagglutinin; COG1705 Muramidase (flagellum-specific).
    
 0.935
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
 0.917
EDM43080.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.906
EDM43878.1
beta-N-acetylglucosaminidase; COG1472 Beta-glucosidase-related glycosidases.
 
 
0.893
EDM43484.1
LysM-repeat protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
 0.865
EDM45417.1
COG5009 Membrane carboxypeptidase/penicillin-binding protein.
     
 0.858
EDM44355.1
Putative carboxypeptidase; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
 
  
 0.847
EDM45034.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.812
EDM43759.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.812
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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