STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43087.1A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase. (379 aa)    
Predicted Functional Partners:
EDM44021.1
COG2120 Uncharacterized proteins, LmbE homologs.
  
 
  0.833
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
  
  0.794
EDM45453.1
Hypothetical protein; Belongs to the UPF0403 family.
  
     0.769
EDM43086.1
B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases.
       0.615
EDM45310.1
Hydrolase; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
  
  0.542
EDM43085.1
Hypothetical protein.
 
     0.535
EDM45159.1
Pyridine nucleotide-disulphide oxidoreductase, putative; COG0492 Thioredoxin reductase.
  
     0.530
EDM44461.1
GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
     
  0.498
EDM43083.1
Phosphoheptose isomerase.
   
  0.489
EDM43455.1
COG2120 Uncharacterized proteins, LmbE homologs.
  
 
  0.482
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.