Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EDM43099.1Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport. (702 aa)    
Predicted Functional Partners:
EDM45605.1
COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
     
  0.538
EDM45110.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.527
EDM45725.1
COG0419 ATPase involved in DNA repair.
  
     0.502
EDM45213.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.499
EDM44335.1
Putative aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.499
EDM43791.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.499
EDM44744.1
Hypothetical protein.
  
     0.470
EDM43100.1
COG3011 Uncharacterized protein conserved in bacteria.
       0.439
EDM43101.1
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.439
EDM44542.1
Conserved hypothetical signal peptide protein.
  
     0.437
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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