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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44479.1SEC-independent protein translocase protein TATC; COG2346 Truncated hemoglobins. (121 aa)    
Predicted Functional Partners:
EDM44480.1
Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.782
EDM44478.1
Transcriptional regulator, BadM/Rrf2 family protein; COG1959 Predicted transcriptional regulator.
 
    0.700
EDM44481.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
 
     0.641
EDM44484.1
DSBA oxidoreductase; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.
  
  
 0.586
EDM44482.1
Alkylhydroperoxidase AhpD domain protein.
 
     0.545
EDM44477.1
COG0513 Superfamily II DNA and RNA helicases.
       0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.