STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44484.1DSBA oxidoreductase; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis. (219 aa)    
Predicted Functional Partners:
EDM44483.1
Hypothetical protein.
       0.689
EDM44485.1
Redoxin domain protein; COG1225 Peroxiredoxin.
       0.625
EDM44479.1
SEC-independent protein translocase protein TATC; COG2346 Truncated hemoglobins.
  
  
 0.600
EDM44482.1
Alkylhydroperoxidase AhpD domain protein.
 
     0.568
EDM44773.1
GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase); In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.533
EDM44470.1
COG0431 Predicted flavoprotein.
  
    0.516
EDM43117.1
COG0818 Diacylglycerol kinase.
     
  0.507
EDM45165.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
    
   0.496
EDM44389.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
    
   0.496
EDM44809.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
    
   0.496
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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