STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44493.1Hypothetical protein; COG3211 Predicted phosphatase. (562 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.839
folE-3
COG0302 GTP cyclohydrolase I.
       0.714
EDM44494.1
Putative regulatory protein (nitrile hydratase activator like); COG0523 Putative GTPases (G3E family).
 
     0.635
EDM44496.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.628
EDM44497.1
Hypothetical protein.
 
     0.614
EDM44495.1
ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.596
nadK
NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
  0.570
EDM45356.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
  0.516
EDM44211.1
COG1785 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.484
EDM44491.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
  
 0.454
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.