STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44495.1ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (209 aa)    
Predicted Functional Partners:
EDM44496.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  0.987
EDM44141.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.960
EDM44497.1
Hypothetical protein.
 
    0.948
EDM43465.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.944
EDM45029.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.926
EDM42941.1
Putative transmembrane permease; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
  0.778
EDM45305.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
  0.778
EDM44494.1
Putative regulatory protein (nitrile hydratase activator like); COG0523 Putative GTPases (G3E family).
  
    0.746
EDM45667.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.721
EDM42935.1
Gliding motility-related protein; possible outer membrane protein.
   
 
 0.708
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.