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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44503.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.888
EDM44507.1
Hypothetical secreted protein.
 
     0.774
EDM44504.1
COG1454 Alcohol dehydrogenase, class IV.
 
     0.756
EDM44505.1
Secreted metal-dependent enzyme of cyclase family protein.
 
     0.755
EDM44313.1
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
  
 0.688
EDM44073.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
   
    0.679
EDM44502.1
Succinic semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.601
EDM45392.1
Gluconokinase and phosphogluconate dehydrogenase (decarboxylating) fusion; COG3265 Gluconate kinase; Belongs to the 6-phosphogluconate dehydrogenase family.
     
 0.575
EDM44442.1
Probable carbohydrate kinase, PfkB family protein; COG0524 Sugar kinases, ribokinase family.
   
 
 0.572
EDM45403.1
PfkB domain protein; COG0524 Sugar kinases, ribokinase family.
   
 
 0.572
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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