STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44507.1Hypothetical secreted protein. (418 aa)    
Predicted Functional Partners:
EDM44505.1
Secreted metal-dependent enzyme of cyclase family protein.
 
     0.843
EDM44346.1
Hypothetical protein.
  
  
  0.836
EDM45497.1
Thermolysin; COG3227 Zinc metalloprotease (elastase).
  
  
 0.820
EDM44030.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
  0.809
EDM42918.1
CHU large protein; uncharacterized.
  
     0.775
EDM43311.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
    
 0.774
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
    
 0.774
EDM45621.1
CHU large protein; uncharacterized.
  
     0.774
EDM43539.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
    
 0.774
EDM44503.1
Hypothetical protein.
 
     0.774
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.