STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44513.1Hypothetical protein; COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain. (85 aa)    
Predicted Functional Partners:
EDM44514.1
Hypothetical protein; COG3668 Plasmid stabilization system protein; Belongs to the RelE toxin family.
 
   0.969
EDM43698.1
COG3668 Plasmid stabilization system protein; Belongs to the RelE toxin family.
  
   0.765
cobB
COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.491
EDM43381.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
   
   0.472
EDM45092.1
Hypothetical protein.
   
   0.472
EDM45354.1
Hypothetical protein.
   
   0.472
EDM45387.1
Hypothetical protein.
   
   0.472
EDM45484.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
   
   0.472
EDM42906.1
Hypothetical plasmid-stabilisation protein.
   
   0.472
EDM44801.1
Hypothetical protein.
   
   0.472
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.