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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44539.1Peptidase, M16 family protein; COG0612 Predicted Zn-dependent peptidases. (945 aa)    
Predicted Functional Partners:
EDM42911.1
Ferredoxin 2 with 4Fe-4S binding domain; COG1145 Ferredoxin.
  
   0.886
EDM44274.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.837
EDM44273.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
 0.828
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
   
  0.785
EDM45680.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
   
  0.785
EDM44538.1
COG0668 Small-conductance mechanosensitive channel.
       0.773
EDM44431.1
Oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.748
EDM43857.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.748
EDM44642.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
  0.748
EDM45707.1
Deoxyguanosine kinase/deoxyadenosine kinase subunit; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
   
  0.716
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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