STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44595.1COG2866 Predicted carboxypeptidase. (799 aa)    
Predicted Functional Partners:
EDM44593.1
Hypothetical protein.
 
     0.767
EDM42938.1
Thermophilic serine proteinase; COG1404 Subtilisin-like serine proteases.
  
     0.630
EDM45423.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease; COG1404 Subtilisin-like serine proteases.
 
     0.567
EDM44355.1
Putative carboxypeptidase; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
    
 0.555
EDM44917.1
Hypothetical protein.
  
     0.548
EDM43646.1
COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
 
     0.531
EDM45260.1
Hypothetical protein.
  
     0.525
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.523
EDM44596.1
long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase); COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
       0.507
EDM44325.1
Conserved repeat domain; COG2759 Formyltetrahydrofolate synthetase.
  
     0.491
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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